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Microbiologie & Sciences Humaines

P-R

Paenibacillus

Range of percentages of similarity : 89,8 – 99,4 %

130 species studied

minimum : P. siamensis AB295645 – P. pueri EU391155

maximum : P. antarcticus AJ605292 – P. macquariensis AB073193 ;

P. cellulositrophicus FJ178001 – P. cineris JQ762408

Pandoraea

Range of percentages of similarity : 95,8- 99,7 %

9 species studied

minimum : P. norimbergensis Y09879 – P. thiooxydans EF397578

maximum : P. sputorum JQ839144 – P. oxalativorans AB469785 ; P. vervacti AB510956 – P.pnomenusa AY268170

Pantoea

Range of percentages of similarity : 95,9 – 99,5 %

19 species studied

minimum : P. calida GQ367478 – P. rodasii JF295053

maximum : P. allii AY530795 – P. ananatis U80196

Pasteurella

Range of percentages of similarity : 86,1 – 98,8 %

14 species studied

minimum : P. lymphangitidis HF558372 – P. pneumotropica GU809183

maximum : P. P. dagmatis AY362920 – P. stomatis AY362925

Peptoniphilus

Range of percentages of similarity : 86,8 – 97,9 %

10 species studied

minimum : P. olsenii DQ911242 – P. ivoricii Y07840

maximum : P. asaccharolyticus AF542228 – P. indolicus AY153431

Peptostreptococcus

Range of percentages of similarity : 95,3 – 98,8 %

3 species studied

minimum : P. stomatis DQ160208 – P. russellii AY167952

maximum : P. stomatis DQ160208 – P. anaerobius AY326462

Photobacterium

Range of percentages of similarity : 97,6 – 99,4 %

21 species studied

minimum : P. angustum D25307 – P. ganghwense AY960847

maximum : P. indicum AB016982 – P. frigidiphilum AY538749

Photorhabdus

Range of percentages of similarity : 97,6 – 98,0 %

3 species studied

minimum : P. asymbiotica subsp. asymbiotica Z76755 – P. temperata subsp. temperata AJ007405

maximum : P. asymbiotica subsp. asymbiotica Z76755 – P. luminescens subsp. luminescens X82248

Planctomyces

Range of percentages of similarity : 84,2 – 87,2 %

3 species studied

minimum : P. brasiliensis AJ231190 – P. limnophilus X62911

maximum : P. brasiliensis AJ231190 – P. maris AJ231184

Porphyromonas

Range of percentages of similarity : 84,4 – 99,9 %

16 species studied

minimum : P. uenonis AB547668 – P. bennonis EU414673

maximum : P. cansulci AB547655 – P. crevioricanis GU233446

Prevotella

Range of percentages of similarity : 82,6 – 98,1 %

46 species studied

minimum : P. pallens Y13105 – P. tannerae AF183404

maximum : P. malaninogenica AY323525 – P. scopos FJ545434

Propionibacterium

Range of percentages of similarity : 89,3 – 99,2 %

11 species studied

minimum : P. acidifaciens EU979537 - P. jensenii AJ704571

maximum : P. avidum AJ003055 – P. propionicum AJ003058

Proteus

Range of percentages of similarity : 94,5 – 99,3 %

7 species studied

minimum : P. penneri DQ885258 – P. rettgeri AM040492

maximum : P. penneri DQ885258 – P. vulgaris DQ885262

Providencia

Range of percentages of similarity : 97,5 – 99,5 %

8 species studied

minimum : P. alcalifaciens AJ301684 – P. vermicola AM040495

maximum : P. vermicola AM040495 – P. rettgeri AM040492

Pseudoclavibacter

Range of percentages of similarity : 92,8 – 96,6 %

4 species studied

minimum : P. caeni HQ266601- P. helvolus X77440

maximum : P. chungagensis FJ514934 - P. helvolus X77440

Pseudomonas

Range of percentages of similarity : 82,3 - 100 %

142 species studied

minimum : P. aeruginosa X06684 – P. carboxydohydrogena AB021393

maximum : P. parafulva AB046999 – P. cremoricoloranta AB060137

Psychrobacter

Range of percentages of similarity : 93,0 – 99,9 %

34 species studied

minimum : P. immobilis U39399 – P. lutiphocae FM165580

maximum : P. marincola AJ309941 – P. submarinus AJ309940

Ralstonia

Range of percentages of similarity : 97,6 – 99,0 %

5 species studied

minimum : R. insidiosa AF488779 – R. mannitolilytica AJ270258

maximum : R. solanacearum EF016361 – R. sygygii NR_025975

Raoultella

Range of percentages of similarity : 98,7 – 99,3 %

3 species studied

minimum : R. ornithinolytica U78182 – R. terrigena Y17658

maximum : R. ornithinolytica U78182 – R. planticola AF129443

Rhizobium

Range of percentages of similarity : 86,9 – 99,9 %

54 species studied

minimum : R. aggregatus X73041 – R. lupini X87273

maximum : R. fabae DQ835303 – R. pisi AY509899

Rhodobacter

Range of percentages of similarity : 92,2 - 99,9 %

12 species studied

minimum : R. aestuarii AM748926 - R. ovatus AM690348

maximum : R. johrii AM398152 - R. sphaeroides NR_029215

Rhodococcus

Range of percentages of similarity : 93,8 -100 %

32 species studied

minimum : R. fascians X79186 - R. gordoniae EU741104

maximum : R. jialingiae DQ185597 - R. qingshengii DQ090961

Rickettsia

Range of percentages of similarity : 97,5 - 99,8 %

26 species studied

minimum : R. akari L36099 - R. canadensis

maximum : R. conorii AF541999 - R. slovaca L36224
R. rickettsii L36217 - R. peacockii DQ062433

Rothia

Range of percentages of similarity : 95,2 – 97,9 %

6 species studied

minimum : R. aeria AB071952 – R. terrae DQ822568

maximum : R. aeria AB071952 – R. dentocariosa CP002280

Ruminococcus

Range of percentages of similarity : 82,0 – 96,8 %

9 species studied

minimum : R. bromii EU266549 – R. obeum X85101

maximum : R. feacis FJ611794 – R. torques L76604


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